species:   Drmel
pid:       MI0011581
parent:    dme-mir-2492
paralog:   
locus:     NC_004354.4:11547422-11547497
matures:   ['AUGUUUUGUCGAGAGCUUUCAAA', 'UUGGGAUCUCUUUAUAAAGCGUUU']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NC_004354.4:11547422-11547497

0 out of bounds
4 alignments
4 proper strand
4 stranded perfect matches

        ***********************              **********************         
GAAUUUUUUUGGGAUCUCUUUAUAAAGCGUUUAUUAUUUAUUUAUUAUGUUUUGUCGAGAGCUUUCAAAAAAUUCA
(((((((((.((((.(((((.(((((((((................))))))))).))))).))))))))))))).
----------------------------------------------AUGUUUUGUCGAGAGCUUUCAAA------- l=23 a=0 c
--------UUGGGAUCUCUUUAUAAAGCGUUU-------------------------------------------- l=24 a=0 c*
-----------------------------------------------UGUUUUGUCGAGAGCUUUCA--------- l=20 a=2 ma
----------GGGAUCUCUUUAUAAAGCGUU--------------------------------------------- l=21 a=0 ma*

---------UGGGAUCUCUUUAUAAAGCGUUUAU------------------------------------------ l=25 a=1 
-----------------------------------------------UGUUUUGUCGAGAGCUUUCA--------- l=20 a=2 (ma)
-------------------------------------------------UUUUGUCGAGAGCUUUCAAAA------ l=21 a=1 

mb-01011
ax-1011011
ku-01
ss-101111111100
fn-011
